Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_08120 | Not Available | Negative | 1845703 - 1845894 | 7200.8 |
| hypothetical protein | DW048_08125 | Not Available | Positive | 1846036 - 1846410 | 13927.9 |
| hypothetical protein | DW048_08130 | Not Available | Positive | 1846407 - 1847054 | 24265.7 |
| hypothetical protein | DW048_08135 | Not Available | Positive | 1847090 - 1847389 | 11534.2 |
| fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase | DW048_08140 | Not Available | Positive | 1847777 - 1849633 | 68788.2 |
| hypothetical protein | DW048_08145 | Not Available | Positive | 1849909 - 1850346 | 17467.4 |
| abc transporter permease | DW048_08150 | Not Available | Negative | 1850408 - 1852720 | 87575.3 |
| abc transporter atp-binding protein | DW048_08155 | Not Available | Negative | 1852740 - 1853414 | 24853.2 |
| m3 family peptidase | DW048_08165 | Not Available | Positive | 1856079 - 1858184 | 79164.9 |
| acyltransferase | DW048_08170 | Not Available | Positive | 1858364 - 1859524 | 44353.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

