Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vrr-nuc domain-containing protein | DW048_08065 | Not Available | Negative | 1839599 - 1840012 | 16068.5 |
| duf4494 domain-containing protein | DW048_08070 | Not Available | Negative | 1840002 - 1840619 | 22951.0 |
| hu family dna-binding protein | DW048_08075 | Not Available | Negative | 1840616 - 1840891 | 10413.9 |
| hypothetical protein | DW048_08080 | Not Available | Negative | 1840980 - 1841159 | 6632.25 |
| hypothetical protein | DW048_08085 | Not Available | Negative | 1841211 - 1841960 | 27880.4 |
| hypothetical protein | DW048_08095 | Not Available | Negative | 1842889 - 1844859 | 75752.5 |
| Trna-undet | Not Available | Not Available | Positive | 1844887 - 1844976 | Not Available |
| hypothetical protein | DW048_08105 | Not Available | Negative | 1844980 - 1845249 | 10502.7 |
| hypothetical protein | DW048_08110 | Not Available | Negative | 1845261 - 1845506 | 9424.56 |
| hypothetical protein | DW048_08115 | Not Available | Negative | 1845493 - 1845690 | 7435.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

