Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | DW048_07910 | Not Available | Positive | 1821279 - 1821623 | 13491.3 |
| xre family transcriptional regulator | DW048_07915 | Not Available | Positive | 1821628 - 1821939 | 11412.9 |
| hypothetical protein | DW048_07920 | Not Available | Positive | 1822186 - 1823676 | 56765.2 |
| hypothetical protein | DW048_07925 | Not Available | Positive | 1823744 - 1824250 | 19497.7 |
| hypothetical protein | DW048_07930 | Not Available | Positive | 1824234 - 1824479 | 9071.23 |
| hypothetical protein | DW048_07935 | Not Available | Positive | 1824467 - 1824826 | 13648.4 |
| n-acetylmuramoyl-l-alanine amidase | DW048_07940 | Not Available | Positive | 1824841 - 1825446 | 22850.8 |
| hypothetical protein | DW048_07945 | Not Available | Positive | 1825430 - 1825978 | 20801.3 |
| hypothetical protein | DW048_07950 | Not Available | Positive | 1825981 - 1826430 | 17465.7 |
| hypothetical protein | DW048_07955 | Not Available | Positive | 1826449 - 1826961 | 18986.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

