Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DW048_00535 | Not Available | Negative | 101384 - 102544 | 45010.9 |
| gaf domain-containing protein | DW048_00545 | Not Available | Negative | 104276 - 104761 | 18151.8 |
| phosphorylase | DW048_00550 | Not Available | Negative | 104971 - 105849 | 32767.5 |
| upf0365 family protein | DW048_00555 | Not Available | Negative | 106043 - 107044 | 36124.0 |
| nodulation efficiency protein d (nfed) | DW048_00560 | Not Available | Negative | 107187 - 107657 | 17112.5 |
| hypothetical protein | DW048_00565 | Not Available | Negative | 107671 - 109080 | 54177.8 |
| adenine nucleotide alpha hydrolase family protein | DW048_00570 | Not Available | Positive | 109224 - 109979 | 29155.8 |
| hypothetical protein | DW048_00575 | Not Available | Negative | 110673 - 110894 | 8511.09 |
| hypothetical protein | DW048_00580 | Not Available | Negative | 111593 - 111901 | 11839.7 |
| hypothetical protein | DW048_00585 | Not Available | Negative | 111938 - 112216 | 10801.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

