Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_07760 | Not Available | Positive | 1773444 - 1774655 | 45865.6 |
| hypothetical protein | DW048_07765 | Not Available | Positive | 1775083 - 1775325 | 8929.99 |
| port family protein | DW048_07770 | Not Available | Positive | 1775341 - 1776117 | 28978.5 |
| arylsulfatase | DW048_07780 | Not Available | Negative | 1776824 - 1778341 | 57853.4 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DW048_07785 | Not Available | Negative | 1778553 - 1782098 | 129333.0 |
| atp-binding protein | DW048_07790 | Not Available | Negative | 1782141 - 1783319 | 46146.3 |
| tolc family protein | DW048_07800 | Not Available | Negative | 1784669 - 1786042 | 51781.2 |
| trkh family potassium uptake protein | DW048_07815 | Not Available | Positive | 1790922 - 1792430 | 56375.6 |
| recombinase xerc | DW048_07825 | Not Available | Negative | 1794305 - 1795318 | 39090.4 |
| integrase | DW048_07830 | Not Available | Negative | 1795302 - 1796258 | 37552.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

