Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | DW048_07700 | Not Available | Positive | 1757714 - 1759354 | 61146.5 |
| phospho-sugar mutase | DW048_07705 | Not Available | Positive | 1759668 - 1761413 | 64726.5 |
| eama family transporter | DW048_07710 | Not Available | Positive | 1761596 - 1762516 | 34715.8 |
| aldose 1-epimerase family protein | DW048_07715 | Not Available | Negative | 1762565 - 1763440 | 33986.8 |
| tetratricopeptide repeat protein | DW048_07720 | Not Available | Positive | 1763607 - 1765658 | 79999.5 |
| dna-binding response regulator | DW048_07725 | Not Available | Positive | 1765786 - 1766550 | 29814.6 |
| hypothetical protein | DW048_07735 | Not Available | Positive | 1768532 - 1769026 | 18022.2 |
| hypothetical protein | DW048_07740 | Not Available | Positive | 1769177 - 1769662 | 18259.8 |
| hypothetical protein | DW048_07745 | Not Available | Positive | 1769675 - 1770625 | 35123.1 |
| hypothetical protein | DW048_07750 | Not Available | Positive | 1770633 - 1771568 | 34616.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

