Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW048_07650 | Not Available | Positive | 1748292 - 1748873 | 21484.8 |
| lysr family transcriptional regulator | DW048_07655 | Not Available | Positive | 1748886 - 1749782 | 34367.8 |
| putative sulfate exporter family transporter | DW048_07660 | Not Available | Positive | 1749871 - 1750857 | 35064.0 |
| duf4010 domain-containing protein | DW048_07665 | Not Available | Negative | 1750949 - 1752238 | 48266.9 |
| hypothetical protein | DW048_07670 | Not Available | Negative | 1752317 - 1752799 | 17545.9 |
| ecf transporter s component | DW048_07675 | Not Available | Positive | 1752933 - 1753448 | 18780.8 |
| twin-arginine translocase tata/tate family subunit | DW048_07680 | Not Available | Positive | 1753589 - 1753792 | 7276.18 |
| twin-arginine translocase subunit tatc | DW048_07685 | Not Available | Positive | 1753799 - 1754629 | 32346.6 |
| alanine dehydrogenase | DW048_07690 | Not Available | Negative | 1754716 - 1755807 | 38997.8 |
| m23 family peptidase | DW048_07695 | Not Available | Positive | 1756001 - 1757671 | 62671.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

