Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqqd family protein | DW048_07465 | Not Available | Negative | 1703741 - 1704010 | 10032.2 |
| hypothetical protein | DW048_07475 | Not Available | Positive | 1707956 - 1708159 | 7982.77 |
| restriction endonuclease subunit s | DW048_07480 | Not Available | Positive | 1708899 - 1710209 | 50186.3 |
| type ii pantothenate kinase | DW048_07510 | Not Available | Negative | 1715721 - 1716545 | 29299.7 |
| 9-o-acetylesterase | DW048_07515 | Not Available | Negative | 1716623 - 1718539 | 72609.5 |
| pap2 family protein | DW048_07520 | Not Available | Negative | 1718577 - 1719194 | 23044.7 |
| response regulator | DW048_07525 | Not Available | Negative | 1719301 - 1723290 | 152143.0 |
| hypothetical protein | DW048_07530 | Not Available | Positive | 1723587 - 1724342 | 28172.2 |
| fluoride efflux transporter crcb | DW048_07535 | Not Available | Negative | 1724417 - 1724782 | 13272.6 |
| peptidase t | DW048_07545 | Not Available | Positive | 1726394 - 1727614 | 45347.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

