Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1685355 - 1685429 | Not Available |
| aspartate--ammonia ligase | DW048_07400 | Not Available | Positive | 1685632 - 1686672 | 39784.2 |
| alpha-galactosidase | DW048_07405 | Not Available | Negative | 1686766 - 1688259 | 55006.8 |
| hypothetical protein | DW048_07410 | Not Available | Negative | 1688418 - 1688876 | 17148.7 |
| ragb/susd family nutrient uptake outer membrane protein | DW048_07415 | Not Available | Negative | 1688932 - 1690635 | 64980.1 |
| uracil-dna glycosylase | DW048_07425 | Not Available | Positive | 1694286 - 1694948 | 24957.5 |
| lps-assembly protein lptd | DW048_07430 | Not Available | Negative | 1695025 - 1697760 | 103867.0 |
| hdig domain-containing protein | DW048_07435 | Not Available | Negative | 1697851 - 1698387 | 20327.6 |
| s26 family signal peptidase | DW048_07445 | Not Available | Negative | 1699628 - 1700095 | 18099.4 |
| hypothetical protein | DW048_07450 | Not Available | Negative | 1700064 - 1700978 | 33762.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

