Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DW048_07320 | Not Available | Positive | 1657096 - 1658529 | 55035.1 |
| dna-binding response regulator | DW048_07325 | Not Available | Positive | 1658593 - 1659252 | 25193.3 |
| glycoside hydrolase family 92 protein | DW048_07340 | Not Available | Negative | 1663164 - 1665416 | 85487.5 |
| cyclically-permuted mutarotase family protein | DW048_07350 | Not Available | Negative | 1667493 - 1668620 | 40491.5 |
| beta-n-acetylhexosaminidase | DW048_07355 | Not Available | Negative | 1668807 - 1671131 | 86342.9 |
| glycoside hydrolase family 2 protein | DW048_07360 | Not Available | Negative | 1671148 - 1673715 | 98675.7 |
| sialate o-acetylesterase | DW048_07365 | Not Available | Negative | 1673742 - 1675805 | 77780.3 |
| sialate o-acetylesterase | DW048_07370 | Not Available | Negative | 1675802 - 1676467 | 25131.8 |
| beta-n-acetylhexosaminidase | DW048_07375 | Not Available | Negative | 1676469 - 1678475 | 77047.3 |
| sialidase | DW048_07380 | Not Available | Negative | 1678479 - 1680119 | 60315.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

