Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase | DW048_07255 | Not Available | Positive | 1639955 - 1641964 | 75663.2 |
| tigr02757 family protein | DW048_07260 | Not Available | Negative | 1642118 - 1642882 | 29837.6 |
| arac family transcriptional regulator | DW048_07265 | Not Available | Negative | 1642948 - 1643826 | 34389.8 |
| efflux rnd transporter periplasmic adaptor subunit | DW048_07270 | Not Available | Positive | 1644003 - 1645070 | 39289.3 |
| tolc family protein | DW048_07280 | Not Available | Positive | 1648225 - 1649604 | 51471.9 |
| dna-binding protein | DW048_07285 | Not Available | Negative | 1649819 - 1650523 | 26967.6 |
| hypothetical protein | DW048_07290 | Not Available | Negative | 1650489 - 1650608 | 4138.87 |
| hypothetical protein | DW048_07295 | Not Available | Positive | 1650928 - 1651599 | 25597.6 |
| atp-binding cassette domain-containing protein | DW048_07305 | Not Available | Positive | 1652661 - 1653338 | 25613.2 |
| glpgli family protein | DW048_07315 | Not Available | Negative | 1656059 - 1656925 | 32764.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

