Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | DW048_07030 | Not Available | Negative | 1578883 - 1579209 | 12456.0 |
| gnat family n-acetyltransferase | DW048_07035 | Not Available | Positive | 1579386 - 1579883 | 19339.5 |
| dna alkylation repair protein | DW048_07040 | Not Available | Positive | 1579904 - 1580620 | 28334.2 |
| duf4301 family protein | DW048_07050 | Not Available | Negative | 1582094 - 1583611 | 56896.4 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DW048_07055 | Not Available | Positive | 1583755 - 1585968 | 84511.3 |
| duf1573 domain-containing protein | DW048_07065 | Not Available | Positive | 1586437 - 1586850 | 14899.0 |
| metallophosphoesterase | DW048_07070 | Not Available | Positive | 1587059 - 1587865 | 31228.2 |
| oligopeptide transporter, opt family | DW048_07080 | Not Available | Positive | 1588677 - 1590668 | 70043.7 |
| alpha/beta hydrolase | DW048_07085 | Not Available | Positive | 1590702 - 1591547 | 30960.9 |
| ferritin | DW048_07090 | Not Available | Negative | 1591999 - 1592481 | 17891.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

