Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-amino-7-oxononanoate synthase | DW048_06970 | Not Available | Negative | 1566620 - 1567771 | 43139.3 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | DW048_06975 | Not Available | Negative | 1567799 - 1569070 | 47780.3 |
| biotin synthase biob | DW048_06980 | Not Available | Negative | 1569109 - 1570068 | 35544.0 |
| hypothetical protein | DW048_06985 | Not Available | Negative | 1570141 - 1570446 | 11608.2 |
| alpha-amylase | DW048_06995 | Not Available | Negative | 1570676 - 1571992 | 50546.5 |
| glycosyltransferase family 1 protein | DW048_07000 | Not Available | Negative | 1572011 - 1573276 | 47628.2 |
| 4-alpha-glucanotransferase | DW048_07005 | Not Available | Negative | 1573291 - 1575231 | 74889.3 |
| rhomboid family intramembrane serine protease | DW048_07010 | Not Available | Positive | 1575412 - 1576077 | 25210.0 |
| hypothetical protein | DW048_07015 | Not Available | Positive | 1576244 - 1576561 | 12420.2 |
| pspc domain-containing protein | DW048_07025 | Not Available | Negative | 1577824 - 1578870 | 38260.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

