Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | DW048_06900 | Not Available | Negative | 1553437 - 1554294 | 33273.6 |
| Trna-asp | Not Available | Not Available | Positive | 1554559 - 1554635 | Not Available |
| l-asparaginase 2 | DW048_06910 | Not Available | Negative | 1554737 - 1555795 | 37843.8 |
| nitronate monooxygenase | DW048_06920 | Not Available | Positive | 1557503 - 1558453 | 34200.4 |
| sodium:solute symporter | DW048_06925 | Not Available | Negative | 1558662 - 1560095 | 52161.4 |
| atp-binding cassette domain-containing protein | DW048_06935 | Not Available | Negative | 1561202 - 1562650 | 55056.9 |
| hypothetical protein | DW048_06945 | Not Available | Positive | 1563375 - 1564100 | 25779.0 |
| atp-dependent dethiobiotin synthetase biod | DW048_06955 | Not Available | Negative | 1564544 - 1565188 | 24302.0 |
| malonyl-[acyl-carrier protein] o-methyltransferase bioc | DW048_06960 | Not Available | Negative | 1565203 - 1565958 | 28823.8 |
| duf452 family protein | DW048_06965 | Not Available | Negative | 1565970 - 1566623 | 25142.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

