Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | DW048_06775 | Not Available | Negative | 1526039 - 1528270 | 84409.6 |
| peptidase | DW048_06785 | Not Available | Negative | 1529622 - 1531220 | 60242.0 |
| crp/fnr family transcriptional regulator | DW048_06790 | Not Available | Positive | 1531363 - 1531941 | 22566.6 |
| long-chain fatty acid--coa ligase | DW048_06805 | Not Available | Negative | 1535083 - 1536741 | 62504.7 |
| dihydroorotate dehydrogenase-like protein | DW048_06810 | Not Available | Negative | 1536918 - 1537892 | 35565.3 |
| yggs family pyridoxal phosphate-dependent enzyme | DW048_06815 | Not Available | Negative | 1537906 - 1538574 | 25372.4 |
| duf4494 domain-containing protein | DW048_06820 | Not Available | Negative | 1538608 - 1539090 | 18209.6 |
| fucose isomerase | DW048_06825 | Not Available | Negative | 1539186 - 1540421 | 46173.4 |
| pyridoxal phosphate-dependent aminotransferase | DW048_06830 | Not Available | Positive | 1540587 - 1541789 | 44969.1 |
| abc transporter permease | DW048_06835 | Not Available | Positive | 1541791 - 1543035 | 46917.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

