Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnfabcdge type electron transport complex subunit d | DW048_06715 | Not Available | Positive | 1513721 - 1514710 | 35342.5 |
| electron transport complex subunit e | DW048_06725 | Not Available | Positive | 1515515 - 1516099 | 20626.5 |
| electron transport complex subunit rsxa | DW048_06730 | Not Available | Positive | 1516118 - 1516720 | 21298.3 |
| hypothetical protein | DW048_06735 | Not Available | Positive | 1516862 - 1517758 | 33994.2 |
| udp-glucose 4-epimerase gale | DW048_06740 | Not Available | Positive | 1517791 - 1518825 | 37984.7 |
| yitt family protein | DW048_06750 | Not Available | Positive | 1521135 - 1522025 | 32573.4 |
| aspartate ammonia-lyase | DW048_06755 | Not Available | Positive | 1522288 - 1523721 | 52251.4 |
| hypothetical protein | DW048_06760 | Not Available | Negative | 1523665 - 1523970 | 11612.0 |
| hypothetical protein | DW048_06765 | Not Available | Negative | 1523942 - 1524322 | 14324.3 |
| hypothetical protein | DW048_06770 | Not Available | Negative | 1524381 - 1525868 | 56248.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

