Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinoprotein amine dehydrogenase | DW048_06595 | Not Available | Negative | 1484672 - 1485748 | 39478.4 |
| hypothetical protein | DW048_06605 | Not Available | Positive | 1487924 - 1488109 | 7590.64 |
| d-2-hydroxyacid dehydrogenase | DW048_06615 | Not Available | Positive | 1489540 - 1490496 | 34386.8 |
| c_gcaxxg_c_c family protein | DW048_06620 | Not Available | Positive | 1490540 - 1491043 | 18535.1 |
| hypothetical protein | DW048_06625 | Not Available | Positive | 1491200 - 1491403 | 7433.15 |
| type ii toxin-antitoxin system hica family toxin | DW048_06630 | Not Available | Positive | 1491558 - 1491746 | 6962.6 |
| antitoxin hicb | DW048_06635 | Not Available | Positive | 1491786 - 1492178 | 14724.7 |
| elongation factor 4 | DW048_06640 | Not Available | Positive | 1492262 - 1494043 | 66375.4 |
| na+/h+ antiporter nhaa | DW048_06645 | Not Available | Positive | 1494175 - 1495515 | 48637.6 |
| pas domain-containing sensor histidine kinase | DW048_06650 | Not Available | Negative | 1495518 - 1497791 | 87699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

