Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW048_06540 | Not Available | Positive | 1475009 - 1475758 | 29121.8 |
| hypothetical protein | DW048_06545 | Not Available | Positive | 1475895 - 1476716 | 31277.4 |
| hypothetical protein | DW048_06550 | Not Available | Positive | 1476906 - 1477121 | 8582.31 |
| putative toxin-antitoxin system toxin component, pin family | DW048_06555 | Not Available | Positive | 1477135 - 1477542 | 15726.8 |
| hypothetical protein | DW048_06560 | Not Available | Positive | 1477650 - 1477907 | 9828.75 |
| toprim domain-containing protein | DW048_06570 | Not Available | Positive | 1480240 - 1481763 | 58060.8 |
| hypothetical protein | DW048_06575 | Not Available | Negative | 1482151 - 1482465 | 13007.3 |
| n-acetylmuramoyl-l-alanine amidase | DW048_06580 | Not Available | Negative | 1482716 - 1483132 | 15868.4 |
| dna-binding protein | DW048_06585 | Not Available | Negative | 1483391 - 1483879 | 17535.0 |
| duf4248 domain-containing protein | DW048_06590 | Not Available | Positive | 1484230 - 1484448 | 8477.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

