Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW048_06355 | Not Available | Positive | 1431011 - 1432945 | 71600.1 |
| is66-like element isbvu4 family transposase | DW048_06360 | Not Available | Negative | 1433189 - 1434802 | 61881.8 |
| hypothetical protein | DW048_06365 | Not Available | Negative | 1434871 - 1435380 | 19798.7 |
| arac family transcriptional regulator | DW048_06375 | Not Available | Negative | 1435761 - 1436606 | 32419.7 |
| efflux rnd transporter periplasmic adaptor subunit | DW048_06380 | Not Available | Positive | 1436770 - 1437825 | 38721.4 |
| acrb/acrd/acrf family protein | DW048_06385 | Not Available | Positive | 1437844 - 1440891 | 112577.0 |
| tolc family protein | DW048_06390 | Not Available | Positive | 1440891 - 1442183 | 48422.8 |
| hypothetical protein | DW048_06395 | Not Available | Positive | 1442332 - 1443519 | 45303.0 |
| duf1705 domain-containing protein | DW048_06400 | Not Available | Positive | 1443506 - 1445212 | 64929.2 |
| d-xylose transporter xyle | DW048_06405 | Not Available | Positive | 1445327 - 1446703 | 50087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

