Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna methylase | DW048_06210 | Not Available | Negative | 1389102 - 1390367 | 47309.1 |
| group ii intron reverse transcriptase/maturase | DW048_06215 | Not Available | Negative | 1390364 - 1391185 | 32264.3 |
| hypothetical protein | DW048_06220 | Not Available | Positive | 1391324 - 1393210 | 73030.6 |
| signal peptidase i | DW048_06225 | Not Available | Positive | 1393219 - 1394121 | 35303.0 |
| o-antigen ligase domain-containing protein | DW048_06235 | Not Available | Positive | 1395637 - 1397286 | 61935.2 |
| efflux rnd transporter periplasmic adaptor subunit | DW048_06240 | Not Available | Positive | 1397339 - 1398406 | 39187.2 |
| n-acetylglucosamine-6-phosphate deacetylase | DW048_06260 | Not Available | Positive | 1406226 - 1407389 | 42262.9 |
| threonylcarbamoyl-amp synthase | DW048_06265 | Not Available | Positive | 1407556 - 1408131 | 21163.3 |
| methionyl-trna formyltransferase | DW048_06275 | Not Available | Positive | 1409955 - 1410929 | 36638.5 |
| hypothetical protein | DW048_06280 | Not Available | Negative | 1411002 - 1411784 | 29095.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

