Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein traj | DW048_06100 | Not Available | Negative | 1364345 - 1365349 | 37157.8 |
| duf4141 domain-containing protein | DW048_06105 | Not Available | Negative | 1365353 - 1365982 | 24177.4 |
| duf3876 domain-containing protein | DW048_06110 | Not Available | Negative | 1366006 - 1366386 | 14375.4 |
| trag family conjugative transposon atpase | DW048_06115 | Not Available | Negative | 1366427 - 1368931 | 96398.6 |
| duf4133 domain-containing protein | DW048_06120 | Not Available | Negative | 1368928 - 1369260 | 12696.9 |
| duf4134 domain-containing protein | DW048_06125 | Not Available | Negative | 1369271 - 1369588 | 10824.2 |
| conjugal transfer protein trad | DW048_06130 | Not Available | Negative | 1369790 - 1370518 | 27079.8 |
| duf3408 domain-containing protein | DW048_06135 | Not Available | Negative | 1370535 - 1370888 | 13677.4 |
| duf3408 domain-containing protein | DW048_06140 | Not Available | Negative | 1370891 - 1371331 | 16688.7 |
| para family protein | DW048_06145 | Not Available | Negative | 1371334 - 1372383 | 39523.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

