Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF41-8MH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AF41-8MH AF41-8MH.Scaf230, whole
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DW048_05980 | Not Available | Negative | 1348978 - 1349658 | 25970.1 |
| helicase | DW048_05985 | Not Available | Positive | 1349987 - 1351384 | 53086.0 |
| duf1573 domain-containing protein | DW048_05990 | Not Available | Positive | 1351509 - 1351790 | 10436.5 |
| rna polymerase sigma-70 factor | DW048_05995 | Not Available | Positive | 1351872 - 1352459 | 22849.5 |
| duf4974 domain-containing protein | DW048_06000 | Not Available | Positive | 1352578 - 1353522 | 35932.4 |
| hypothetical protein | DW048_06010 | Not Available | Positive | 1354107 - 1354517 | 14889.3 |
| hypothetical protein | DW048_06020 | Not Available | Positive | 1354679 - 1354894 | 7821.07 |
| hypothetical protein | DW048_06025 | Not Available | Positive | 1354906 - 1355127 | 9023.77 |
| pcfk-like protein | DW048_06030 | Not Available | Positive | 1355141 - 1355557 | 16136.1 |
| hypothetical protein | DW048_06035 | Not Available | Positive | 1355554 - 1356885 | 51671.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

