Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_04155 | Not Available | - | 1010051 - 1011091 | 39003.9 |
| hypothetical protein | DW150_04160 | Not Available | - | 1011305 - 1012876 | 57195.0 |
| hypothetical protein | DW150_04165 | Not Available | + | 1013147 - 1013452 | 12151.0 |
| duf3868 domain-containing protein | DW150_04170 | Not Available | - | 1013759 - 1015219 | 54327.9 |
| duf3575 domain-containing protein | DW150_04175 | Not Available | - | 1015232 - 1015801 | 21771.4 |
| duf5033 domain-containing protein | DW150_04180 | Not Available | + | 1016241 - 1016846 | 22823.2 |
| response regulator | DW150_04185 | Not Available | + | 1017199 - 1021320 | 157510.0 |
| translational gtpase typa | DW150_04190 | Not Available | + | 1021387 - 1023189 | 67346.3 |
| proton-conducting membrane transporter | DW150_04195 | Not Available | - | 1023249 - 1023899 | 23861.1 |
| phosphoenolpyruvate carboxykinase (atp) | DW150_04200 | Not Available | - | 1024007 - 1025614 | 59104.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
