Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_04105 | Not Available | - | 998609 - 1001101 | 93104.6 |
| 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | DW150_04110 | Not Available | + | 1001186 - 1001881 | 25540.5 |
| s-ribosylhomocysteine lyase | DW150_04115 | Not Available | + | 1001893 - 1002378 | 18472.3 |
| 30s ribosomal protein s15 | DW150_04120 | Not Available | - | 1002481 - 1002750 | 10364.5 |
| duf5106 domain-containing protein | DW150_04125 | Not Available | - | 1002829 - 1003764 | 36237.8 |
| hypothetical protein | DW150_04130 | Not Available | - | 1003837 - 1004124 | 11273.4 |
| hypothetical protein | DW150_04135 | Not Available | - | 1004148 - 1004417 | 10338.5 |
| hypothetical protein | DW150_04140 | Not Available | - | 1004437 - 1006461 | 74369.3 |
| hypothetical protein | DW150_04145 | Not Available | - | 1006485 - 1008548 | 77200.9 |
| hypothetical protein | DW150_04150 | Not Available | - | 1008597 - 1010027 | 53207.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
