Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4248 domain-containing protein | DW150_03380 | Not Available | - | 843933 - 844151 | 8477.29 |
| dna-binding protein | DW150_03385 | Not Available | + | 844502 - 844990 | 17535.0 |
| n-acetylmuramoyl-l-alanine amidase | DW150_03390 | Not Available | + | 845250 - 845666 | 15894.3 |
| toprim domain-containing protein | DW150_03400 | Not Available | - | 846588 - 848111 | 58064.9 |
| duf4373 domain-containing protein | DW150_03405 | Not Available | - | 848507 - 850087 | 59670.9 |
| hypothetical protein | DW150_03410 | Not Available | - | 850321 - 850578 | 9838.79 |
| hypothetical protein | DW150_03415 | Not Available | - | 850683 - 850907 | 8371.79 |
| hypothetical protein | DW150_03420 | Not Available | + | 851055 - 851306 | 9583.96 |
| hypothetical protein | DW150_03425 | Not Available | - | 851526 - 851777 | 9598.15 |
| hypothetical protein | DW150_03430 | Not Available | - | 851843 - 852664 | 31177.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
