Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_02970 | Not Available | + | 763539 - 764375 | 32810.5 |
| arac family transcriptional regulator | DW150_02975 | Not Available | + | 764674 - 765519 | 32580.4 |
| ketopantoate reductase family protein | DW150_02980 | Not Available | + | 765516 - 766490 | 35843.7 |
| hypothetical protein | DW150_02985 | Not Available | + | 766529 - 766768 | 9516.39 |
| hypothetical protein | DW150_02990 | Not Available | + | 766755 - 767141 | 15230.9 |
| dna-binding protein | DW150_02995 | Not Available | + | 767270 - 767590 | 12612.3 |
| duf3408 domain-containing protein | DW150_03005 | Not Available | + | 768605 - 768904 | 11504.8 |
| dna-binding protein | DW150_03010 | Not Available | + | 768901 - 769218 | 11977.3 |
| duf3876 domain-containing protein | DW150_03015 | Not Available | + | 769229 - 769531 | 11593.8 |
| dna-binding protein | DW150_03020 | Not Available | + | 769580 - 769873 | 11484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
