Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4369 domain-containing protein | DW150_02855 | Not Available | + | 741173 - 742321 | 42986.4 |
| transcription elongation factor grea | DW150_02860 | Not Available | + | 742522 - 742986 | 16780.4 |
| hit family protein | DW150_02865 | Not Available | + | 743038 - 743445 | 15026.2 |
| transposase | DW150_02870 | Not Available | + | 743725 - 745078 | 52704.5 |
| hypothetical protein | DW150_02875 | Not Available | + | 745491 - 745919 | 16676.0 |
| beta-galactosidase | DW150_02880 | Not Available | - | 746676 - 748715 | 78194.0 |
| port family protein | DW150_02885 | Not Available | - | 749010 - 749687 | 25444.9 |
| hypothetical protein | DW150_02895 | Not Available | + | 751184 - 751549 | 13081.2 |
| flavodoxin | DW150_02905 | Not Available | - | 752066 - 752737 | 24253.6 |
| flavodoxin | DW150_02910 | Not Available | - | 752792 - 753490 | 25307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
