Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsz | DW150_02640 | Not Available | - | 694095 - 695399 | 47936.9 |
| cell division protein ftsa | DW150_02645 | Not Available | - | 695437 - 696948 | 55253.2 |
| cell division protein ftsq | DW150_02650 | Not Available | - | 696952 - 697689 | 27932.4 |
| udp-n-acetylmuramate--l-alanine ligase | DW150_02655 | Not Available | - | 697686 - 699062 | 51194.4 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DW150_02660 | Not Available | - | 699052 - 700182 | 40519.6 |
| ftsw/roda/spove family cell cycle protein | DW150_02665 | Not Available | - | 700247 - 701644 | 51089.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DW150_02670 | Not Available | - | 701668 - 703002 | 49975.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DW150_02675 | Not Available | - | 703017 - 704285 | 47070.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DW150_02680 | Not Available | - | 704298 - 705752 | 53347.3 |
| pasta domain-containing protein | DW150_02685 | Not Available | - | 705771 - 707951 | 80325.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
