Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_02590 | Not Available | - | 680878 - 683589 | 98473.0 |
| arac family transcriptional regulator | DW150_02595 | Not Available | - | 683662 - 684147 | 19011.1 |
| hypothetical protein | DW150_02600 | Not Available | + | 684499 - 684717 | 8361.26 |
| mfs transporter | DW150_02605 | Not Available | - | 684855 - 686210 | 49078.2 |
| 4-alpha-glucanotransferase | DW150_02610 | Not Available | - | 686284 - 688962 | 104478.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DW150_02615 | Not Available | - | 689290 - 691254 | 72970.4 |
| 30s ribosomal protein s20 | DW150_02620 | Not Available | - | 691701 - 691955 | 9698.07 |
| Trna-glu | Not Available | Not Available | + | 691995 - 692069 | Not Available |
| dna repair protein reco | DW150_02630 | Not Available | + | 692313 - 693038 | 28684.9 |
| gatb/yqey domain-containing protein | DW150_02635 | Not Available | - | 693624 - 694073 | 15932.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
