Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW150_02330 | Not Available | + | 604028 - 604528 | 19560.6 |
| hypothetical protein | DW150_02335 | Not Available | + | 604594 - 607011 | 88447.3 |
| hypothetical protein | DW150_02340 | Not Available | + | 607405 - 608361 | 36443.6 |
| radical sam protein | DW150_02345 | Not Available | + | 608358 - 609428 | 41152.7 |
| hypothetical protein | DW150_02350 | Not Available | + | 609449 - 609697 | 8726.2 |
| mfs transporter araj | DW150_02355 | Not Available | + | 609890 - 611074 | 42249.1 |
| response regulator | DW150_02360 | Not Available | - | 611069 - 615376 | 165851.0 |
| tonb-dependent receptor | DW150_02365 | Not Available | + | 615531 - 618569 | 112085.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW150_02370 | Not Available | + | 618593 - 620473 | 71553.3 |
| hypothetical protein | DW150_02375 | Not Available | - | 620598 - 621017 | 15716.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
