Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | DW150_02180 | Not Available | - | 569003 - 570286 | 49717.8 |
| hypothetical protein | DW150_02185 | Not Available | - | 570359 - 570583 | 7934.24 |
| tonb-dependent receptor | DW150_02190 | Not Available | - | 570643 - 573042 | 91923.1 |
| dna-binding response regulator | DW150_02195 | Not Available | - | 573093 - 573761 | 24775.0 |
| hypothetical protein | DW150_02200 | Not Available | + | 574124 - 574357 | 8130.79 |
| 6-bladed beta-propeller | DW150_02205 | Not Available | + | 574457 - 575671 | 46014.1 |
| radical sam peptide maturase | DW150_02210 | Not Available | + | 575673 - 577175 | 58562.7 |
| hypothetical protein | DW150_02215 | Not Available | + | 577178 - 578446 | 49815.5 |
| sensor histidine kinase | DW150_02220 | Not Available | - | 578602 - 579969 | 52152.3 |
| hypothetical protein | DW150_02225 | Not Available | + | 580377 - 580595 | 7684.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
