Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_21940 | Not Available | - | 5225647 - 5228763 | 116723.0 |
| helix-turn-helix domain-containing protein | DW150_21945 | Not Available | - | 5228876 - 5229124 | 9422.46 |
| integrase | DW150_21950 | Not Available | + | 5229273 - 5230505 | 46922.3 |
| integrase | DW150_21955 | Not Available | + | 5230498 - 5231502 | 39124.9 |
| integrase | DW150_21960 | Not Available | + | 5231486 - 5232394 | 35078.5 |
| hypothetical protein | DW150_21965 | Not Available | + | 5232605 - 5233009 | 14887.8 |
| transposase | DW150_21970 | Not Available | + | 5232997 - 5233347 | 13595.7 |
| is66 family transposase | DW150_21975 | Not Available | + | 5233434 - 5234999 | 60573.4 |
| glpgli family protein | DW150_21980 | Not Available | + | 5235203 - 5236909 | 63525.2 |
| hypothetical protein | DW150_21995 | Not Available | + | 5239036 - 5239608 | 22340.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
