Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | + | 5029470 - 5029557 | Not Available |
| tatd family deoxyribonuclease | DW150_21120 | Not Available | - | 5029727 - 5030500 | 29492.6 |
| polyprenyl synthetase family protein | DW150_21125 | Not Available | - | 5030502 - 5031479 | 36988.9 |
| energy transducer tonb | DW150_21130 | Not Available | - | 5031561 - 5032244 | 25665.9 |
| hypothetical protein | DW150_21135 | Not Available | + | 5032427 - 5032632 | 7709.44 |
| 9-o-acetylesterase | DW150_21145 | Not Available | - | 5033160 - 5035076 | 72773.8 |
| pap2 family protein | DW150_21150 | Not Available | - | 5035114 - 5035731 | 23112.8 |
| hybrid sensor histidine kinase/response regulator | DW150_21155 | Not Available | - | 5035843 - 5039832 | 152205.0 |
| hypothetical protein | DW150_21160 | Not Available | + | 5040129 - 5040884 | 28277.3 |
| fluoride efflux transporter crcb | DW150_21165 | Not Available | - | 5040958 - 5041323 | 13272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
