Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_20600 | Not Available | + | 4928177 - 4928392 | 8301.7 |
| aldo/keto reductase | DW150_20605 | Not Available | + | 4928407 - 4929531 | 42402.8 |
| hypothetical protein | DW150_20610 | Not Available | + | 4929544 - 4930602 | 38753.3 |
| esterase family protein | DW150_20615 | Not Available | + | 4930624 - 4931541 | 34839.4 |
| formylglycine-generating enzyme family protein | DW150_20620 | Not Available | + | 4931538 - 4932407 | 32450.0 |
| flavodoxin | DW150_20625 | Not Available | + | 4932425 - 4932985 | 20708.8 |
| sugar o-acetyltransferase | DW150_20630 | Not Available | + | 4933015 - 4933581 | 20635.8 |
| iron-containing alcohol dehydrogenase | DW150_20635 | Not Available | + | 4933599 - 4934765 | 42908.3 |
| nadph-flavin oxidoreductase | DW150_20640 | Not Available | + | 4934779 - 4935777 | 37029.6 |
| gamma-carboxymuconolactone decarboxylase | DW150_20645 | Not Available | + | 4935913 - 4936677 | 28276.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
