Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr00341 family protein | DW150_01980 | Not Available | + | 529132 - 530496 | 50722.6 |
| s46 family peptidase | DW150_01985 | Not Available | + | 530501 - 532627 | 80100.0 |
| atp-dependent rna helicase | DW150_01990 | Not Available | - | 532872 - 534746 | 70784.2 |
| hypothetical protein | DW150_01995 | Not Available | + | 534985 - 535419 | 15697.2 |
| tonb-dependent receptor | DW150_02000 | Not Available | + | 535492 - 537726 | 83985.0 |
| cation transporter | DW150_02005 | Not Available | + | 537755 - 538120 | 13569.4 |
| transcriptional regulator | DW150_02010 | Not Available | - | 538418 - 538630 | 7810.6 |
| hypothetical protein | DW150_02015 | Not Available | - | 538635 - 538892 | 10187.6 |
| duf2975 domain-containing protein | DW150_02020 | Not Available | - | 538903 - 539550 | 24281.7 |
| duf2975 domain-containing protein | DW150_02025 | Not Available | - | 539567 - 540196 | 23219.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
