Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | + | 467746 - 467818 | Not Available |
| duf1622 domain-containing protein | DW150_01715 | Not Available | - | 467824 - 468165 | 12601.8 |
| alpha-ribazole phosphatase | DW150_01720 | Not Available | - | 468217 - 468747 | 19914.6 |
| adenosylcobinamide-gdp ribazoletransferase | DW150_01725 | Not Available | - | 468741 - 469490 | 27780.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DW150_01730 | Not Available | - | 469493 - 470530 | 37530.6 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DW150_01735 | Not Available | - | 470539 - 471048 | 19446.2 |
| fha domain-containing protein | DW150_01740 | Not Available | - | 471053 - 471577 | 19818.0 |
| spor domain-containing protein | DW150_01745 | Not Available | - | 471593 - 472723 | 41940.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DW150_01750 | Not Available | + | 472842 - 474155 | 48164.3 |
| duf4738 domain-containing protein | DW150_01755 | Not Available | + | 474175 - 474963 | 29361.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
