Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | DW150_17560 | Not Available | + | 4187306 - 4187932 | 23007.0 |
| thiazole synthase | DW150_17565 | Not Available | + | 4187950 - 4188723 | 27519.5 |
| phosphomethylpyrimidine synthase thic | DW150_17570 | Not Available | + | 4188732 - 4190432 | 63476.0 |
| hypothetical protein | DW150_17575 | Not Available | + | 4190454 - 4190969 | 19511.8 |
| flavodoxin family protein | DW150_17580 | Not Available | + | 4190969 - 4191541 | 21311.5 |
| 2-iminoacetate synthase thih | DW150_17585 | Not Available | + | 4191627 - 4192757 | 43251.8 |
| hesa/moeb/thif family protein | DW150_17590 | Not Available | + | 4192835 - 4193527 | 25388.8 |
| glutathionylspermidine synthase family protein | DW150_17595 | Not Available | - | 4193641 - 4194765 | 42920.3 |
| hypothetical protein | DW150_17600 | Not Available | - | 4194778 - 4195131 | 12947.3 |
| thiamine phosphate synthase | DW150_17605 | Not Available | + | 4195352 - 4195960 | 22854.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
