Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_00120 | Not Available | + | 32124 - 33638 | 57672.9 |
| gliding motility lipoprotein gldh | DW150_00125 | Not Available | + | 33601 - 34098 | 18778.5 |
| rod shape-determining protein roda | DW150_00130 | Not Available | - | 34102 - 35556 | 54268.6 |
| penicillin-binding protein 2 | DW150_00135 | Not Available | - | 35537 - 37387 | 69090.3 |
| rod shape-determining protein mred | DW150_00140 | Not Available | - | 37387 - 37887 | 18960.0 |
| rod shape-determining protein mrec | DW150_00145 | Not Available | - | 37896 - 38744 | 31423.4 |
| rod shape-determining protein | DW150_00150 | Not Available | - | 38850 - 39872 | 36937.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DW150_00155 | Not Available | - | 39985 - 41508 | 56236.2 |
| inorganic phosphate transporter | DW150_00160 | Not Available | + | 41788 - 44040 | 83827.5 |
| aminoglycoside phosphotransferase | DW150_00165 | Not Available | + | 44149 - 45231 | 41532.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
