Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin | DW150_01200 | Not Available | + | 344586 - 345737 | 43072.9 |
| 2-aminoethylphosphonate--pyruvate transaminase | DW150_01205 | Not Available | - | 345805 - 346893 | 40693.9 |
| phosphonoacetaldehyde hydrolase | DW150_01210 | Not Available | - | 346900 - 347688 | 29135.4 |
| hypothetical protein | DW150_01215 | Not Available | - | 347731 - 349089 | 51090.7 |
| hypothetical protein | DW150_01220 | Not Available | + | 349336 - 350214 | 33621.2 |
| helicase | DW150_01225 | Not Available | - | 350594 - 352651 | 79335.9 |
| atp-binding protein | DW150_01230 | Not Available | - | 352969 - 356622 | 144586.0 |
| hypothetical protein | DW150_01235 | Not Available | - | 356606 - 357187 | 23365.4 |
| hypothetical protein | DW150_01240 | Not Available | - | 357193 - 358416 | 48463.2 |
| iron-containing alcohol dehydrogenase | DW150_01245 | Not Available | - | 358729 - 359904 | 43312.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
