Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase subunit beta | DW150_00990 | Not Available | + | 302876 - 303169 | 11114.5 |
| duf86 domain-containing protein | DW150_00995 | Not Available | + | 303162 - 303554 | 15161.6 |
| aaa family atpase | DW150_01000 | Not Available | + | 303679 - 305247 | 59919.5 |
| nucleotidyltransferase domain-containing protein | DW150_01005 | Not Available | + | 305430 - 305738 | 11591.2 |
| hepn domain-containing protein | DW150_01010 | Not Available | + | 305735 - 306136 | 15666.6 |
| atp-dependent helicase | DW150_01015 | Not Available | + | 306182 - 308542 | 90176.8 |
| gtp-binding protein | DW150_01020 | Not Available | - | 308656 - 309258 | 23034.9 |
| sodium:solute symporter | DW150_01025 | Not Available | - | 309224 - 310705 | 55350.8 |
| recombination protein recr | DW150_01030 | Not Available | + | 310784 - 311401 | 22458.3 |
| hypothetical protein | DW150_01035 | Not Available | + | 311422 - 311892 | 17782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
