Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_00560 | Not Available | + | 195347 - 195724 | 14687.8 |
| nadh-quinone oxidoreductase subunit a | DW150_00565 | Not Available | + | 195828 - 196178 | 13099.5 |
| nadh-quinone oxidoreductase subunit b | DW150_00570 | Not Available | + | 196169 - 196765 | 22067.9 |
| nadh-quinone oxidoreductase subunit d | DW150_00575 | Not Available | + | 196762 - 198321 | 59740.7 |
| nadh-quinone oxidoreductase subunit nuoh | DW150_00580 | Not Available | + | 198445 - 199521 | 40279.7 |
| nadh-quinone oxidoreductase subunit i | DW150_00585 | Not Available | + | 199521 - 199973 | 16944.7 |
| nadh-quinone oxidoreductase subunit j | DW150_00590 | Not Available | + | 199989 - 200492 | 18224.2 |
| nadh-quinone oxidoreductase subunit nuok | DW150_00595 | Not Available | + | 200498 - 200806 | 11758.6 |
| nadh-quinone oxidoreductase subunit l | DW150_00600 | Not Available | + | 200809 - 202710 | 70268.2 |
| nadh-quinone oxidoreductase subunit m | DW150_00605 | Not Available | + | 202764 - 204245 | 53762.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
