Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_05080 | Not Available | - | 1258336 - 1258584 | 8926.8 |
| duf1573 domain-containing protein | DW150_05085 | Not Available | - | 1258823 - 1259689 | 32926.7 |
| hypothetical protein | DW150_05090 | Not Available | - | 1259693 - 1259914 | 7911.75 |
| winged helix family transcriptional regulator | DW150_05095 | Not Available | + | 1260132 - 1261130 | 38197.5 |
| hypothetical protein | DW150_05100 | Not Available | + | 1261215 - 1261469 | 9842.97 |
| hypothetical protein | DW150_05105 | Not Available | - | 1261669 - 1262778 | 41595.6 |
| arac family transcriptional regulator | DW150_05110 | Not Available | - | 1263021 - 1264778 | 66434.2 |
| duf108 domain-containing protein | DW150_05115 | Not Available | + | 1265282 - 1266070 | 28082.9 |
| dihydrofolate reductase | DW150_05120 | Not Available | - | 1266053 - 1266937 | 32605.2 |
| molecular chaperone djla | DW150_05125 | Not Available | + | 1267044 - 1267826 | 29022.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
