Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW150_04665 | Not Available | - | 1145088 - 1146404 | 50584.3 |
| glycosyltransferase family 2 protein | DW150_04670 | Not Available | + | 1146650 - 1147633 | 38355.5 |
| lta synthase family protein | DW150_04675 | Not Available | + | 1147817 - 1149844 | 77465.0 |
| glycosyltransferase | DW150_04680 | Not Available | - | 1149875 - 1150822 | 36580.4 |
| gtra family protein | DW150_04685 | Not Available | - | 1150859 - 1151233 | 14196.9 |
| glycosyltransferase family 39 protein | DW150_04690 | Not Available | + | 1151320 - 1153044 | 65314.9 |
| alkaline phosphatase family protein | DW150_04695 | Not Available | - | 1153128 - 1154954 | 68108.2 |
| ribonuclease h | DW150_04700 | Not Available | - | 1154970 - 1155596 | 23846.5 |
| arginine--trna ligase | DW150_04705 | Not Available | - | 1155597 - 1157417 | 68001.7 |
| radical sam protein | DW150_04710 | Not Available | - | 1157952 - 1158833 | 33179.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
