Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_04615 | Not Available | + | 1134524 - 1135276 | 29433.6 |
| glycosyltransferase | DW150_04620 | Not Available | + | 1135291 - 1136190 | 34478.5 |
| glycosyltransferase family 2 protein | DW150_04625 | Not Available | + | 1136418 - 1137323 | 35431.3 |
| glycosyltransferase family 8 protein | DW150_04630 | Not Available | + | 1137328 - 1138278 | 37309.3 |
| hypothetical protein | DW150_04635 | Not Available | - | 1138473 - 1139948 | 55356.9 |
| hypothetical protein | DW150_04640 | Not Available | - | 1140070 - 1141527 | 54555.8 |
| hypothetical protein | DW150_04645 | Not Available | - | 1141864 - 1141986 | 4374.19 |
| hypothetical protein | DW150_04650 | Not Available | - | 1141998 - 1142249 | 9670.05 |
| glycosyltransferase | DW150_04655 | Not Available | - | 1142258 - 1143190 | 35598.7 |
| abc transporter atp-binding protein | DW150_04660 | Not Available | - | 1143192 - 1145030 | 68820.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
