Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_04405 | Not Available | - | 1084166 - 1084687 | 20422.8 |
| hypothetical protein | DW150_04410 | Not Available | - | 1084695 - 1086062 | 51650.6 |
| hypothetical protein | DW150_04420 | Not Available | - | 1086623 - 1086847 | 8578.08 |
| outer membrane lipoprotein carrier protein lola | DW150_04425 | Not Available | + | 1087324 - 1087959 | 24788.3 |
| aaa family atpase | DW150_04430 | Not Available | + | 1088114 - 1089688 | 60691.1 |
| hypothetical protein | DW150_04435 | Not Available | + | 1089701 - 1090243 | 20783.8 |
| hydroxymyristoyl-acp dehydratase | DW150_04440 | Not Available | + | 1090245 - 1090625 | 14383.6 |
| hypothetical protein | DW150_04445 | Not Available | - | 1090518 - 1090751 | 9216.37 |
| hypothetical protein | DW150_04455 | Not Available | + | 1091497 - 1091781 | 9654.48 |
| duf4221 domain-containing protein | DW150_04460 | Not Available | + | 1091854 - 1093029 | 45796.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
