Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DW150_04355 | Not Available | + | 1075488 - 1076372 | 34507.1 |
| methyltransferase domain-containing protein | DW150_04360 | Not Available | + | 1076386 - 1077456 | 40667.8 |
| hydroxymyristoyl-acp dehydratase | DW150_04365 | Not Available | + | 1077453 - 1077890 | 16453.2 |
| acyl-coa thioesterase | DW150_04370 | Not Available | + | 1077887 - 1078330 | 17306.7 |
| beta-acp synthase | DW150_04375 | Not Available | + | 1078315 - 1080045 | 63643.1 |
| acyl carrier protein | DW150_04380 | Not Available | + | 1080051 - 1080308 | 9574.45 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | DW150_04385 | Not Available | + | 1080305 - 1081495 | 42051.1 |
| 3-oxoacyl-acp synthase | DW150_04390 | Not Available | + | 1081499 - 1082461 | 35790.1 |
| kila-n domain-containing protein | DW150_04395 | Not Available | + | 1082566 - 1083420 | 33301.9 |
| polysaccharide deacetylase family protein | DW150_04400 | Not Available | + | 1083471 - 1084151 | 26159.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
