Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | DW150_03845 | Not Available | - | 942938 - 944821 | 71323.8 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DW150_03850 | Not Available | - | 944990 - 946834 | 67747.4 |
| glutamate synthase large subunit | DW150_03855 | Not Available | + | 947201 - 951679 | 164969.0 |
| glutamate synthase subunit beta | DW150_03860 | Not Available | + | 951720 - 953060 | 48797.8 |
| hypothetical protein | DW150_03870 | Not Available | + | 954827 - 955060 | 8614.47 |
| hypothetical protein | DW150_03875 | Not Available | + | 954996 - 955277 | 11031.4 |
| hypothetical protein | DW150_03880 | Not Available | + | 955235 - 955453 | 8838.57 |
| carboxypeptidase regulatory-like domain-containing protein | DW150_03885 | Not Available | + | 955527 - 956351 | 31852.3 |
| Trna-thr | Not Available | Not Available | + | 956376 - 956451 | Not Available |
| Trna-leu | Not Available | Not Available | + | 957622 - 957709 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
