Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DW150_03695 | Not Available | - | 908184 - 909047 | 33233.7 |
| glycosyltransferase family 4 protein | DW150_03700 | Not Available | - | 909034 - 910215 | 44747.1 |
| glycosyltransferase family 2 protein | DW150_03705 | Not Available | + | 910828 - 911778 | 37165.1 |
| glycosyltransferase | DW150_03710 | Not Available | - | 911799 - 912824 | 40522.0 |
| hypothetical protein | DW150_03715 | Not Available | - | 912899 - 913081 | 7023.73 |
| glycosyltransferase family 4 protein | DW150_03720 | Not Available | + | 913053 - 914198 | 44038.3 |
| glycosyltransferase family 4 protein | DW150_03725 | Not Available | + | 914195 - 915346 | 44623.9 |
| glycosyltransferase family 1 protein | DW150_03730 | Not Available | + | 915343 - 916476 | 43555.6 |
| glycosyltransferase family 4 protein | DW150_03735 | Not Available | + | 916437 - 917636 | 46005.9 |
| class i sam-dependent methyltransferase | DW150_03740 | Not Available | + | 917633 - 918415 | 31149.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
