Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase domain-containing protein | DW150_03645 | Not Available | + | 898101 - 899561 | 54887.0 |
| glycosyltransferase family 2 protein | DW150_03650 | Not Available | + | 899542 - 900447 | 34457.7 |
| glycosyltransferase | DW150_03655 | Not Available | + | 900444 - 901568 | 43064.3 |
| glycosyltransferase family 2 protein | DW150_03660 | Not Available | + | 901576 - 902736 | 44319.4 |
| acyltransferase | DW150_03665 | Not Available | + | 902741 - 903352 | 22964.1 |
| duf4422 domain-containing protein | DW150_03670 | Not Available | + | 903337 - 904161 | 32718.4 |
| glycosyltransferase | DW150_03675 | Not Available | + | 904165 - 905112 | 36892.3 |
| glycosyltransferase | DW150_03680 | Not Available | - | 905130 - 905945 | 31389.8 |
| glycosyl transferase | DW150_03685 | Not Available | - | 905966 - 906883 | 35709.8 |
| abc transporter atp-binding protein | DW150_03690 | Not Available | - | 906899 - 908170 | 46668.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
