Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_03490 | Not Available | - | 862933 - 863139 | 7755.9 |
| hypothetical protein | DW150_03500 | Not Available | - | 863673 - 863894 | 8816.39 |
| transcriptional regulator | DW150_03505 | Not Available | - | 864011 - 865108 | 42262.0 |
| duf86 domain-containing protein | DW150_03510 | Not Available | - | 865468 - 865842 | 14517.8 |
| nucleotidyltransferase | DW150_03515 | Not Available | - | 865835 - 866128 | 11180.6 |
| carboxypeptidase-like regulatory domain-containing protein | DW150_03520 | Not Available | - | 866239 - 868812 | 99138.6 |
| phosphate transport system regulatory protein phou | DW150_03525 | Not Available | - | 869214 - 869915 | 26837.3 |
| phosphate abc transporter atp-binding protein | DW150_03530 | Not Available | - | 870120 - 870872 | 28168.0 |
| phosphate abc transporter permease psta | DW150_03535 | Not Available | - | 870970 - 871857 | 32162.5 |
| phosphate abc transporter permease subunit pstc | DW150_03540 | Not Available | - | 871870 - 873057 | 42878.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
